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Article
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Incorporating genome-wide association mapping results into genomic prediction models for grain yield and yield stability in CIMMYT spring bread wheat 

Sehgal, D.; Rosyara, U.; Mondal, S.; Singh, R.P.; Poland, J.A.; Dreisigacker, S. (Frontiers, 2020)
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Genomic-enabled prediction with classification algorithms 

Ornella, L.; Pérez, P.; Tapia, E.; González-Camacho, J.M.; Burgueño, J.; Zhang, X.; Singh, S.; Vicente, F.S.; Bonnett, D.; Dreisigacker, S.; Singh, R.; Long, N.; Crossa, J. (Springer Nature, 2014)
Pearson’s correlation coefficient (ρ) is the most commonly reported metric of the success of prediction in genomic selection (GS). However, in real breeding ρ may not be very useful for assessing the quality of the regression ...
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Genomic selection for grain yield in the CIMMYT Wheat Breeding Program—status and perspectives 

Juliana, P.; Singh, R.P.; Braun, H.J.; Huerta-Espino, J.; Crespo-Herrera, L.A.; Velu, G.; Mondal, S.; Poland, J.A.; Shrestha, S. (Frontiers, 2020)
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Harnessing diversity in wheat to enhance grain yield, climate resilience, disease and insect pest resistance and nutrition through conventional and modern breeding approaches 

Mondal, S.; Rutkoski, J.; Velu, G.; Singh, P.K.; Crespo-Herrera, L.A.; Guzman, C.; Bhavani, S.; Caixia Lan; Xinyao He; Singh, R.P. (Frontiers, 2016)
Current trends in population growth and consumption patterns continue to increase the demand for wheat, a key cereal for global food security. Further, multiple abiotic challenges due to climate change and evolving pathogen ...
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Increased prediction accuracy in wheat breeding trials using a marker x environment interaction Genomic Selection model 

Lopez-Cruz, M.; Poland, J.; Jannink, J.L.; De los Campos, G.; Crossa, J.; Singh, R.P.; Dreisigacker, S.; Bonnett, D.; Autrique, E. (Genetics Society of America, 2015)
Genomic selection (GS) models use genome-wide genetic information to predict genetic values of candidates of selection. Originally, these models were developed without considering genotype · environment interaction( G·E). ...
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Genomic selection for quantitative adult plant stem rust resistance in wheat 

Rutkoski, J.; Poland, J.E; Singh, R.P.; Huerta-Espino, J.; Bhavani, S.; Barbier, H.; Rouse, M.N.; Jannink, J.L.; Sorrells, M.E. (Crop Science Society of America, 2014)
Quantitative adult plant resistance (APR) to stem rust (Puccinia graminis f. sp. tritici) is an important breeding target in wheat (Triticum aestivum L.) and a potential target for genomic selection (GS). To evaluate the ...
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Combining high-throughput phenotyping and genomic information to increase prediction and selection accuracy in wheat breeding 

Crain, J. L.; Mondal, S.; Rutkoski, J.; Singh, R.P.; Poland, J. (Crop Science Society of America, 2018)
Genomics and phenomics have promised to revolutionize the field of plant breeding. The integration of these two fields has just begun and is being driven through big data by advances in next-generation sequencing and ...
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New deep learning genomic-based prediction model for multiple traits with binary, ordinal, and continuous phenotypes 

Montesinos-Lopez, O.A.; Martin-Vallejo, J.; Crossa, J.; Gianola, D.; Hernández Suárez, C.M.; Montesinos-López, A.; Juliana, P.; Singh, R.P. (Genetics Society of America, 2019)
Multiple-trait experiments with mixed phenotypes (binary, ordinal and continuous) are not rare in animal and plant breeding programs. However, there is a lack of statistical models that can exploit the correlation between ...
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A benchmarking between deep learning, support vector machine and bayesian threshold best linear unbiased prediction for predicting ordinal traits in plant breeding 

Montesinos-Lopez, O.A.; Martin-Vallejo, J.; Crossa, J.; Gianola, D.; Hernández Suárez, C.M.; Montesinos-Lopez, A.; Juliana, P.; Singh, R.P. (Genetics Society of America, 2019)
Genomic selection is revolutionizing plant breeding. However, still lacking are better statistical models for ordinal phenotypes to improve the accuracy of the selection of candidate genotypes. For this reason, in this ...
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High-throughput phenotyping enabled genetic dissection of crop lodging in wheat 

Singh, D.; Xu Wang; Kumar, U.; Liangliang Gao; Muhammad Noor; Imtiaz, M.; Singh, R.P.; Poland, J.A. (Frontiers, 2019)
Novel high-throughput phenotyping (HTP) approaches are needed to advance the understanding of genotype-to-phenotype and accelerate plant breeding. The first generation of HTP has examined simple spectral reflectance traits ...

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Author
Singh, R.P. (10)
Poland, J. (6)Crossa, J. (4)Mondal, S. (4)Dreisigacker, S. (3)Juliana, P. (3)Rutkoski, J. (3)Bhavani, S. (2)Bonnett, D. (2)Crespo Herrera, L.A. (2)... View More
Date Issued
2020 (2)2019 (3)2018 (1)2016 (1)2015 (1)2014 (2)
Type
Article (10)
Agrovoc
WHEAT (6)MARKER-ASSISTED SELECTION (4)PLANT BREEDING (4)STATISTICAL METHODS (4)GENOMICS (3)ARTIFICIAL SELECTION (2)BAYESIAN THEORY (2)CROP FORECASTING (2)DATA ANALYSIS (2)DISEASE RESISTANCE (2)... View More
Keywords
Genomic Selection (10)
GenPred (3)Shared Data Resources (3)Deep Learning (2)Genomic Prediction (2)High Throughput Phenotyping (2)Support Vector Machine (2)Wheat Breeding (2)APR (1)Cisgenesis (1)... View More


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