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Article
BrAPI - An application programming interface for plant breeding applications
(Oxford University Press, 2019)
Article
Genome wide association study of karnal bunt resistance in a wheat germplasm collection from Afghanistan
(MDPI, 2019)
Karnal bunt disease of wheat, caused by the fungus Neovossia indica, is one of the most important challenges to the grain industry as it affects the grain quality and also restricts the international movement of infected ...
Article
New deep learning genomic-based prediction model for multiple traits with binary, ordinal, and continuous phenotypes
(Genetics Society of America, 2019)
Multiple-trait experiments with mixed phenotypes (binary, ordinal and continuous) are not rare in animal and plant breeding programs. However, there is a lack of statistical models that can exploit the correlation between ...
Article
An update of recent use of Aegilops species in wheat breeding
(Frontiers, 2019)
Aegilops species have significantly contributed to wheat breeding despite the difficulties involved in the handling of wild species, such as crossability and incompatibility. A number of biotic resistance genes have been ...
Article
Estimation of physiological genomic estimated breeding values (PGEBV) combining full hyperspectral and marker data across environments for grain yield under combined heat and drought stress in tropical maize (Zea mays L.)
(Public Library of Science, 2019)
High throughput phenotyping technologies are lagging behind modern marker technology impairing the use of secondary traits to increase genetic gains in plant breeding. We aimed to assess whether the combined use of ...
Article
Highlights of special issue on “Wheat Genetics and Breeding”
(Higher Education Press, 2019)
This special issue on wheat genetics and breeding presents global progress in wheat genomics, breeding for disease resistance, as well as quality improvement, with an excellent collection of nine review articles and one ...
Article
Enhancing the rate of genetic gain in public-sector plant breeding programs: lessons from the breeder’s equation
(Springer, 2019)
The breeder’s equation is the foundational application of quantitative genetics to crop improvement. Guided by the variables that describe response to selection, emerging breeding technologies can make a powerful step ...
Article
Translational research for climate resilient, higher yielding crops
(Hapres; State Key Laboratory of Hybrid Rice, 2019)
Article
A Bayesian genomic multi-output regressor stacking model for predicting multi-trait multi-environment plant breeding data
(Genetics Society of America, 2019)
In this paper we propose a Bayesian multi-output regressor stacking (BMORS) model that is a generalization of the multi-trait regressor stacking method. The proposed BMORS model consists of two stages: in the first stage, ...
Article
Deep kernel for genomic and near infrared predictions in multi-environment breeding trials
(Genetics Society of America, 2019)
Kernel methods are flexible and easy to interpret and have been successfully used in genomic-enabled prediction of various plant species. Kernel methods used in genomic prediction comprise the linear genomic best linear ...