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Article
Genomic Bayesian functional regression models with interactions for predicting wheat grain yield using hyper‑spectral image data
(BioMed Central, 2017)
Modern agriculture uses hyperspectral cameras that provide hundreds of reflectance data at discrete narrow bands in many environments. These bands often cover the whole visible light spectrum and part of the infrared and ...
Article
Genomic prediction using phenotypes from pedigreed lines with no marker data
(Crop Science Society of America (CSSA), 2016)
Until now, genomic prediction (GP) in plant breeding has only used information from individuals that have been genotyped. Information from nongenotyped relatives of genotyped individuals can also be used. Single-step GP ...
Article
Genomic-enabled prediction accuracies increased by modeling genotype × environment interaction in durum wheat
(Crop Science Society of America, 2018)
Genomic prediction studies incorporating genotype × environment (G×E) interaction effects are limited in durum wheat. We tested the genomic-enabled prediction accuracy (PA) of Genomic Best Linear Unbiased Predictor (GBLUP) ...
Article
Single-step genomic and pedigree genotype x environment interaction models for predicting wheat lines in international environments
(Crop Science Society of America, 2017)
Genomic prediction models have been commonly used in plant breeding but only in reduced datasets comprising a few hundred genotyped individuals. However, pedigree information for an entire breeding population is frequently ...
Article
Genomic and pedigree-based prediction for leaf, stem, and stripe rust resistance in wheat
(Springer, 2017)
The unceasing plant-pathogen arms race and ephemeral nature of some rust resistance genes have been challenging for wheat (Triticum aestivum L.) breeding programs and farmers. Hence, it is important to devise strategies ...
Article
Genomic prediction in a large African maize population
(Crop Science Society of America (CSSA), 2017)
Genomic prediction (GP) combines genomewide marker data with phenotypic data in a training population to predict the genomic estimated breeding values of untested individuals in a relevant testing population. Our objective ...
Article
Genomic prediction models for grain yield of spring bread wheat in diverse agro-ecological zones
(Nature Publishing Group, 2016)
Genomic and pedigree predictions for grain yield and agronomic traits were carried out using high density molecular data on a set of 803 spring wheat lines that were evaluated in 5 sites characterized by several environmental ...
Article
Genomic prediction of genotype x environment interaction kernel regression models
(Crop Science Society of America, 2016)
In genomic selection (GS), genotype × environment interaction (G × E) can be modeled by a marker × environment interaction (M × E). The G × E may be modeled through a linear kernel or a nonlinear (Gaussian) kernel. In this ...
Article
Prediction of multiple-trait and multiple-environment genomic data using recommender systems
(Genetics Society of America, 2018)
In genomic-enabled prediction, the task of improving the accuracy of the prediction of lines in environments is difficult because the available information is generally sparse and usually has low correlations between traits. ...
Article
Genomic-enabled prediction Kernel models with random intercepts for multi-environment trials
(Genetics Society of America, 2018)
In this study, we compared the prediction accuracy of the main genotypic effect model (MM) without G×E interactions, the multi-environment single variance G×E deviation model (MDs), and the multienvironment environment-specific ...