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A benchmarking between deep learning, support vector machine and bayesian threshold best linear unbiased prediction for predicting ordinal traits in plant breeding 

Montesinos-Lopez, O.A.; Martin-Vallejo, J.; Crossa, J.; Gianola, D.; Hernández Suárez, C.M.; Montesinos-Lopez, A.; Juliana, P.; Singh, R.P. (Genetics Society of America, 2019)
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Genome-wide association mapping and genomic prediction analyses reveal the genetic architecture of grain yield and flowering time under drought and heat stress conditions in maize 

Yibing Yuan; Cairns, J.E.; Babu, R.; Gowda, M.; Makumbi, D.; Magorokosho, C.; Ao Zhang; Yubo Liu; Nan Wang; Zhuanfang Hao; San Vicente, F.M.; Olsen, M.S.; Prasanna, B.M.; Yanli Lu; Zhang, X. (Blackwell Verlag, 2019)
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A multivariate Poisson deep learning model for genomic prediction of count data 

Montesinos-Lopez, O.A.; Montesinos-Lopez, J.C.; Singh, P.K.; Lozano-Ramirez, N.; Barrón-López, A.; Montesinos-Lopez, A.; Crossa, J. (Genetics Society of America, 2020)
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Genome-wide association study to identify genomic regions influencing spontaneous fertility in maize haploids 

Chaikam, V.; Gowda, M.; Nair, S.K.; Melchinger, A.E.; Prasanna, B.M. (Springer, 2019)
Efficient production and use of doubled haploid lines can greatly accelerate genetic gains in maize breeding programs. One of the critical steps in standard doubled haploid line production is doubling the haploid genome ...
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Genome‑wide association and genomic prediction of resistance to maize lethal necrosis disease in tropical maize germplasm 

Gowda, M.; Das, B.; Makumbi, D.; Babu, R.; Semagn, K.; Mahuku, G.; Olsen, M.S.; Bright, J.M.; Beyene, Y.; Prasanna, B.M. (Springer, 2015)
The maize lethal necrosis disease (MLND) caused by synergistic interaction of Maize chlorotic mottle virus and Sugarcane mosaic virus, and has emerged as a serious threat to maize production in eastern Africa since 2011. ...
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Genomic prediction of gene bank wheat landraces 

Crossa, J.; Jarquin, D.; Franco, J.; Pérez-Rodríguez, P.; Burgueño, J.; Saint Pierre, C.; Vikram, P.; Sansaloni, C.P.; Petroli, C.D.; Akdemir, D.; Sneller, C.; Reynolds, M.P.; Tattaris, M.; Payne, T.S.; Guzman, C.; Peña-Bautista, R.J.; Wenzl, P.; Sukhwinder Singh (Genetics Society of America, 2016)
This study examines genomic prediction within 8416 Mexican landrace accessions and 2403 Iranian landrace accessions stored in gene banks. The Mexican and Iranian collections were evaluated in separate field trials, including ...
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Genomic prediction with genotype by environment interaction analysis for kernel zinc concentration in tropical maize germplasm 

Mageto, E.K.; Crossa, J.; Perez-Rodriguez, P.; Dhliwayo, T.; Palacios-Rojas, N.; Lee, M.; Rui Guo; San Vicente, F.M.; Zhang, X.; Hindu, V. (Genetics Society of America, 2020)
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Maximum a posteriori Threshold Genomic Prediction model for ordinal traits 

Montesinos-López, A.; Gutierrez-Pulido, H.; Montesinos-Lopez, O.A.; Crossa, J. (Genetics Society of America, 2020)
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Genome-wide association study and genomic prediction of Fusarium ear rot resistance in tropical maize germplasm 

Yubo Liu; Guanghui Hu; Ao Zhang; Loladze, A.; Yingxiong Hu; Hui Wang; Jingtao Qu; Zhang, X.; Olsen, M.; San Vicente, F.M.; Crossa, J.; Feng Lin; Prasanna, B.M. (Elsevier, 2020)
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Combination of linkage mapping, GWAS, and GP to dissect the genetic basis of common rust resistance in tropical maize germplasm 

Kibe, M.; Nyaga, C.; Nair, S.K.; Beyene, Y.; Das, B.; Mahabaleswara, S.L.; Jumbo, M.B.; Makumbi, D.; Kinyua, J.; Olsen, M.; Prasanna, B.M.; Gowda, M. (MDPI, 2020)
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Genetic ResourcesInstitutionalIntegrated DevelopmentMaizeSocioeconomicsSustainable IntensificationWheat

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Author
Crossa, J. (9)Boddupalli, Prasanna (6)Montesinos-Lopez, Osval Antonio (6)Gowda, Manje (5)Montesinos-López, A. (5)Juliana, P. (4)Olsen, Michael (4)Pérez-Rodríguez, Paulino (4)ZHANG, XUECAI (4)Makumbi, D. (3)... View More
Date Issued
2020 (8)2019 (5)2016 (1)2015 (2)
Type
Article (16)
Agrovoc
GENOMICS (6)MAIZE (6)MARKER-ASSISTED SELECTION (5)BAYESIAN THEORY (4)FORECASTING (3)GENOTYPE ENVIRONMENT INTERACTION (3)PLANT BREEDING (3)CHROMOSOME MAPPING (2)DATA ANALYSIS (2)FERTILITY (2)... View More
Keywords
Genomic Prediction (16)
Genomic Selection (7)GenPred (7)Shared Data Resources (7)Genome-Wide Association Study (3)Association Mapping (2)Deep Learning (2)Doubled Haploid (2)Haploid Fertility (HF) (2)Haploid Male Fertility (HMF) (2)... View More


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