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Article
Genomic and pedigree-based prediction for leaf, stem, and stripe rust resistance in wheat
(Springer, 2017)
The unceasing plant-pathogen arms race and ephemeral nature of some rust resistance genes have been challenging for wheat (Triticum aestivum L.) breeding programs and farmers. Hence, it is important to devise strategies ...
Article
Single-step genomic and pedigree genotype x environment interaction models for predicting wheat lines in international environments
(Crop Science Society of America, 2017)
Genomic prediction models have been commonly used in plant breeding but only in reduced datasets comprising a few hundred genotyped individuals. However, pedigree information for an entire breeding population is frequently ...
Article
Regularized selection indices for breeding value prediction using hyper-spectral image data
(Nature Publishing Group, 2020)
Article
Effect of leaf rust on grain yield and yield traits of durum wheats with race-specific and slow-rusting resistance to leaf rust
(American Phytopathological Society (APS), 2006)
Leaf rust, caused by Puccinia triticina, is an important disease of durum wheat (Triticum turgidum) in many countries. We compared the effectiveness of different types of resistance in International Maize and Wheat Improvement ...
Article
Genomic prediction using phenotypes from pedigreed lines with no marker data
(Crop Science Society of America (CSSA), 2016)
Until now, genomic prediction (GP) in plant breeding has only used information from individuals that have been genotyped. Information from nongenotyped relatives of genotyped individuals can also be used. Single-step GP ...
Article
Genome-wide association mapping for resistance to leaf rust, stripe rust and tan spot in wheat reveals potential candidate genes
(Springer, 2018)
Leaf rust (LR), stripe rust (YR) and tan spot (TS) are some of the important foliar diseases in wheat (Triticum aestivum L.). To identify candidate resistance genes for these diseases in CIMMYT?s (International Maize and ...
Article
A Bayesian genomic multi-output regressor stacking model for predicting multi-trait multi-environment plant breeding data
(Genetics Society of America, 2019)
In this paper we propose a Bayesian multi-output regressor stacking (BMORS) model that is a generalization of the multi-trait regressor stacking method. The proposed BMORS model consists of two stages: in the first stage, ...
Article
Joint use of genome, pedigree, and their interaction with environment for predicting the performance of wheat lines in new environments
(Genetics Society of America, 2019)
Genome-enabled prediction plays an essential role in wheat breeding because it has the potential to increase the rate of genetic gain relative to traditional phenotypic and pedigree-based selection. Since the performance ...
Article
Article
Hyperspectral reflectance-derived relationship matrices for genomic prediction of grain yield in wheat
(Genetics Society of America, 2019)
Hyperspectral reflectance phenotyping and genomic selection are two emerging technologies that have the potential to increase plant breeding efficiency by improving prediction accuracy for grain yield. Hyperspectral cameras ...