Person: Erginbas Orakci, G.
Loading...
Email Address
Birth Date
Research Projects
Organizational Units
Job Title
Last Name
Erginbas Orakci
First Name
G.
Name
Erginbas Orakci, G.
ORCID ID
0000-0003-2734-4316 7 results
Search Results
Now showing 1 - 7 of 7
- Occurrence, identification and phylogenetic analyses of cereal cyst nematodes (Heterodera spp.) in Turkey(Elsevier, 2017) Jiang-Kuan Cui; Huan Peng; Shiming Liu; Erginbas Orakci, G.; Imren, M.; Dababat, A.A.; De-Liang Peng
Publication - Distribution and diversity of cyst nematode (Nematoda: Heteroderidae) populations in the Republic of Azerbaijan, and their molecular characterization using ITS-rDNA analysis(Organization of Nematologists of Tropical America, 2019) Dababat, A.A.; Muminjanov, H.; Erginbas Orakci, G.; Ahmadova Fakhraddin, G.; Waeyenberge, L.; Yildiz, S.; Duman, N.; Imren, M.Cereal cyst nematodes (Heterodera spp.) are a significant threat to global cereal production systems and choosing the correct management strategy requires knowledge and identification of various species. We conducted a survey across the main cereal-growing regions of the Republic of Azerbaijan in 2017. Cyst-forming nematodes were detected in 34 samples (44.7%), of which 28 were identified as H. filipjevi or H. avenae using internal transcribed spacer (ITS)-rDNA sequencing. Six populations were unidentifiable to species level and were recorded as belonging to the H. avenae group. H. filipjevi was the dominant species, found in 19 samples (25%) from the provinces of Qobustan, İsmailli, Oguz, Sheki, Barda, and Kurdamir. H. avenae was detected in 9 samples (11.8%) across the provinces of İsmailli, Oguz, and Sheki. ITS-rDNA phylogenetic analyses showed that populations of H. filipjevi clustered in one group with two subgroups, all supported by high bootstrap values. Populations of H. avenae also clustered in one group with two subgroups. Genetic dissimilarities were higher within populations of H. filipjevi when compared to populations of H. avenae. The density of many of these cyst populations approached or exceeded the maximum threshold level for economic losses. This is the first report on H. filipjevi and H. avenae in Azerbaijan. The knowledge of cereal cyst nematode presence is extremely important for Azerbaijan’s agricultural industry when assessing the occurrence and distribution of soilborne diseases. Management measures to control cereal cyst nematodes should be directed towards breeding for resistant germplasm, crop rotation, and implementing other management practices.
Publication - Association analysis of resistance to cereal cyst nematodes (Heterodera avenae) and root lesion nematodes (Pratylenchus neglectus and P. thornei) in CIMMYT advanced spring wheat lines for semi-arid conditions(Japanese Society of Breeding, 2016) Dababat, A.A.; Gomez-Becerra, H.F.; Erginbas Orakci, G.; Dreisigacker, S.; Imren, M.; Toktay, H.; Elekcioglu, I.H.; Tesfamariam Mekete; Nicol, J.M.; Ansari, O.; Ogbonnaya, F.C.To identify loci linked to nematode resistance genes, a total of 126 of CIMMYT advanced spring wheat lines adapted to semi-arid conditions were screened for resistance to Heterodera avenae, Pratylenchus neglectus, and P. thornei, of which 107 lines were genotyped with 1,310 DArT. Association of DArT markers with nematode response was analyzed using the general linear model. Results showed that 11 markers were associated with resistance to H. avenae (pathotype Ha21), 25 markers with resistance to P. neglectus, and 9 significant markers were identified to be linked with resistance to P. thornei. In this work we confirmed that chromosome 4A (~90–105 cM) can be a source of resistance to P. thornei as has been recently reported. Other significant markers were also identified on chromosomal regions where no resistant genes have been reported for both nematodes species. These novel QTL were mapped to chromosomes 5A, 6A, and 7A for H. avenae; on chromosomes 1A, 1B, 3A, 3B, 6B, 7AS, and 7D for P. neglectus; and on chromosomes 1D, 2A, and 5B for P. thornei and represent potentially new loci linked to resistance that may be useful for selecting parents and deploying resistance into elite germplasm adapted to regions where nematodes are causing problem.
Publication - First report of sugar beet nematode, Heterodera schachtii Schmidt, 1871 (Nemata: Heteroderidae) in sugar beet growing areas of Sanliurfa, Turkey(Türkiye Entomoloji Derneği, 2016) Jiang-Kuan Cui; Erginbas Orakci, G.; Huan Peng; Wen-Kun Huang; Shiming Liu; Fen Qiao; Elekcioglu, I.H.; Imren, M.; Dababat, A.A.; De-Liang PengThe sugar beet nematode, Heterodera schachtii, is the major pest of sugar beet and causes serious yield losses of about 10-70%. Heterodera schachtii occurs in more than 50 countries and regions, however, there has be limited investigation of H. schachtii in Turkey. Therefore, a survey of H. schachtii in the sugar beet producing regions of Şanlıurfa was conducted in 2014 and 2015 growing seasons. Using morphological and molecular methods, 12 samples collected from three districts, Bozova, Karaköprü and Siverek, in Şanlıurfa Province, Turkey, were identified as H. schachtii. In pathogenicity test, the seedling emergence was delayed and reduced, the seedlings were stunted and necrotic, and the white females of H. schachtii were evident 25 days after inoculation. Phylogenetic analyses were also conducted. The 12 H. schachtii populations from Şanlıurfa Province clustered together with populations from Europe and Morocco at the value of 99%. Sugar beet is the second largest crop in Turkey with the annual production of more 16 Mt. To our best knowledge, this is the first report of H. schachtii in Şanlıurfa Province of Turkey.
Publication - Resistance of winter wheat to Heterodera filipjevi in Turkey(The Scientific and Technology Research Council of Turkey, 2014) Dababat, A.A.; Erginbas Orakci, G.; Toktay, H.; Imren, M.; Akin, B.; Braun, H.J.; Dreisigacker, S.; Elekcioglu, I.H.; Morgounov, A.Cereal cyst nematodes (CCNs) are plant parasites that significantly limit global cereal production. The most frequently reported pathogenic species are Heterodera avenae, H. filipjevi, and H. latipons. One of the most cost-effective, environmentally friendly, and easily adopted control measures is the use of genetic host resistance, which maintains nematode populations below the economic damage threshold level. Many effective sources of resistance to CCNs have been identified in cereals; however, their effectiveness and usefulness is dependent on the interaction of the specific putative resistant accession and the CCN pathotype found in a specific region. In this study, 719 wheat lines from the Facultative and Winter Wheat Observation Nurseries, representing a broad geographical spectrum of breeding lines and varieties from Europe, Central Asia, and the International Winter Wheat Improvement Program, were screened against H. filipjevi under controlled conditions. The results indicated that 114 and 90 genotypes were ranked resistant and moderately resistant, representing 15.8% and 12.5% of the screened genotypes, respectively. The frequency of resistant genotypes observed in the germplasms varied significantly among the different original countries and was the highest for genotypes that originated from Bulgaria (59.3%). From those phenotyped germplasms, a set of 289 lines was genotyped to understand if resistance sources are located at the same site or originate from different locations in the genome.
Publication - Identification of genetic resistance to cereal cyst nematodes; Heterodera avenae (Wollenweber, 1924), Heterodera filipjevi (Madzhidov, 1981) Stelter and Heterodera latipons (Franklin, 1969) in some international bread wheat germplasms(Entomological Society Turkey, Ege University, 2013) Imren, M.; Toktay, H.; Bozbuga, R.; Erginbas Orakci, G.; Dababat, A.A.; Elekcioglu, I.H.The cereal cyst nematodes, Heterodera avenae group, are known as parasites of cereals worldwide. In Turkey, the cereal cyst nematodes, Heterodera filipjevi, H. avenae and H. latipons, are the three known species infested wheat fields and cause high yield losses. The using of resistance varieties is one of the most effective methods for controlling cereal cyst nematodes. Recently, resistance genes (Cre genes) which are obtained from wild wheat genotypes have been transferred into bread wheat varieties to control the cereal cyst nematodes species. In this study, the efficiency of some sources of resistance (CreR, Cre1, Cre2, Cre3, Cre7 and Cre8) in wheat against some Turkish H. avenae, H. filipjevi and H. latipons populations was investigated in-vitro conditions. According to results, the effect of resistance genes showed variation depending on different Cereal cyst nematode populations; H.avenae, H. filipjevi and H. latipons. Although Cre1 gene was only found as completely resistant to all (three) nematode species, Cre3 and Cre7 were found resistant to H. avenae and H. latipons. Cre R was also determined as resistant to H. filipjevi and H. latipons populations but Cre8 was only found resistant against to H. filipjevi population. No resistance was found in Cre 2 gene against to all nematode populations. Additionally, 2 resistance gene-free variety and lines were found resistant to H. avenae; 3 wheat lines to H. filipjevi and 11 wheat genotypes were found moderately resistant to H. latipons.
Publication - Pathotype characterization of the cereal cyst nematode Heterodera filipjevi (Madzhidov, 1981) Stelter in Turkey(Entomological Society Turkey, Ege University, 2013) Toktay, H.; Imren, M.; Bozbuga, R.; Erginbas Orakci, G.; Dababat, A.A.; Elekcioglu, I.H.Turkey is ranked among top ten wheat producing countries in the world. Cereal cyst nematodes are considered one of the most damaging plant parasitic nematodes on wheat worldwide. Up to date, the most effective method of controlling this group of nematodes is the use of crop rotation and resistant varieties. The successful development of disease-resistant plants is contingent on knowledge of the pathotypes of the causal agent. In this study, three populations of Heterodera filipjevi (Madzhidov, 1981) Stelter were collected from different locations (Afsin, Elbistan and Yozgat) in Turkey in order to identify their pathotype using ?The International Test Assortment of Cereal Cultivars?. The results showed that two populations gave a similar reaction to the resistant and susceptible varieties. These populations were determined as Ha 33 pathotype which is a new report for Turkey.
Publication